Cancer Institute A national cancer institute
designated cancer center

Gavin Sherlock

Publication Details

  • Molecular characterization of clonal interference during adaptive evolution in asexual populations of Saccharomyces cerevisiae NATURE GENETICS Kao, K. C., Sherlock, G. 2008; 40 (12): 1499-1504

    Abstract:

    The classical model of adaptive evolution in an asexual population postulates that each adaptive clone is derived from the one preceding it. However, experimental evidence has suggested more complex dynamics, with theory predicting the fixation probability of a beneficial mutation as dependent on the mutation rate, population size and the mutation's selection coefficient. Clonal interference has been demonstrated in viruses and bacteria but not in a eukaryote, and a detailed molecular characterization is lacking. Here we use three different fluorescent markers to visualize the dynamics of asexually evolving yeast populations. For each adaptive clone within one of our evolving populations, we identified the underlying mutations, monitored their population frequencies and used microarrays to characterize changes in the transcriptome. These results represent the most detailed molecular characterization of experimental evolution to date and provide direct experimental evidence supporting both the clonal interference and the multiple mutation models.

    View details for DOI 10.1038/ng.280

    View details for Web of Science ID 000261215900030

    View details for PubMedID 19029899

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