Pehr Harbury
Publications
- Structural ensemble and microscopic elasticity of freely diffusing DNA by direct measurement of fluctuations. Proc Natl Acad Sci U S A. 2013; (16): E1444-51
- Highly parallel translation of DNA sequences into small molecules. PLoS One. 2012; (3): e28056
- Mesofluidic devices for DNA-programmed combinatorial chemistry. PLoS One. 2012; (3): e32299
- Expedient synthesis of a modular phosphate affinity reagent. Bioconjug Chem. 2010; (6): 1010-3
- Response to comment on remeasuring the double helix Science. 2009; (5940): 538-540
- A molecular ruler for measuring quantitative distance distributions. PLoS One. 2008; (10): e3229
- Design of protein-ligand binding based on the molecular-mechanics energy model. J Mol Biol. 2008; (2): 415-24
- Remeasuring the double helix. Science. 2008; (5900): 446-9
- Accurate, conformation-dependent predictions of solvent effects on protein ionization constants. Proc Natl Acad Sci U S A. 2007; (12): 4898-903
- Chemical evolution as a tool for molecular discovery. Annu Rev Biochem. 2007: 331-49
- Potential energy functions for protein design. Curr Opin Struct Biol. 2007; (2): 199-204
- Synthetic ligands discovered by in vitro selection. J Am Chem Soc. 2007; (43): 13137-43
- Misincorporation proton-alkyl exchange (MPAX): engineering cysteine probes into proteins. Curr Protoc Protein Sci. 2005: Unit26.1
- DNA display I. Sequence-encoded routing of DNA populations. PLoS Biol. 2004; (7): E173
- DNA display II. Genetic manipulation of combinatorial chemistry libraries for small-molecule evolution. PLoS Biol. 2004; (7): E174
- DNA display III. Solid-phase organic synthesis on unprotected DNA. PLoS Biol. 2004; (7): E175
- In vitro selection and prediction of TIP47 protein-interaction interfaces. Nat Methods. 2004; (1): 55-60
- Structural test of the parameterized-backbone method for protein design. J Mol Biol. 2004; (1): 289-97
- Automated design of specificity in molecular recognition. Nat Struct Biol. 2003; (1): 45-52
- Rapid mapping of protein structure, interactions, and ligand binding by misincorporation proton-alkyl exchange. J Biol Chem. 2002; (34): 30968-75
- The equilibrium unfolding pathway of a (beta/alpha)8 barrel. J Mol Biol. 2002; (5): 1031-40
- Modular enzymes. Nature. 2001; (6817): 247-52
- Reverse engineering the (beta/alpha )8 barrel fold. Proc Natl Acad Sci U S A. 2001; (6): 3092-7
- Tanford-Kirkwood electrostatics for protein modeling. Proc Natl Acad Sci U S A. 1999; (20): 11145-50
- High-resolution protein design with backbone freedom. Science. 1998; (5393): 1462-7
- Springs and zippers: coiled coils in SNARE-mediated membrane fusion. Structure. 1998; (12): 1487-91
- Repacking protein cores with backbone freedom: structure prediction for coiled coils. Proc Natl Acad Sci U S A. 1995; (18): 8408-12
- Crystal structure of an isoleucine-zipper trimer. Nature. 1994; (6492): 80-3
- A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants. Science. 1993; (5138): 1401-7
- Amsacrine and etoposide hypersensitivity of yeast cells overexpressing DNA topoisomerase II. Cancer Res. 1992; (16): 4467-72
- Extraction of protein-bound ATP and ADP from human platelets in plasma. Thromb Haemost. 1990; (2): 286-90
- Functional distinctions between yeast TATA elements. Mol Cell Biol. 1989; (12): 5298-304
- DNA twisting and the affinity of bacteriophage 434 operator for bacteriophage 434 repressor. Proc Natl Acad Sci U S A. 1988; (13): 4633-7
- Transcriptional activation by yeast GCN4, a functional homolog to the jun oncoprotein. Cold Spring Harb Symp Quant Biol. 1988: 701-9
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